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1.400038 重庆,陆军军医大学(第三军医大学)第一附属医院放射科
2.401329 重庆,重庆知见生命科技有限公司
3.404000 重庆,重庆大学附属三峡医院放射科
[陈伟,E-mail:landcw@163.comCHEN Wei, E-mail: landcw@163.com
收稿:2023-07-30,
修回:2023-09-12,
纸质出版:2023-11-15
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曾梦, 赵娜, 王显棋, 等. 基于胸部CT图像的肺炎深度学习分类预测模型[J]. 陆军军医大学学报, 2023,45(21):2266-2274.
Meng ZENG, Na ZHAO, Xianqi WANG, et al. Establishment of a chest-CT-image-based classification deep learning model for pneumonia prediction[J]. Journal of Army Medical University, 2023, 45(21): 2266-2274.
曾梦, 赵娜, 王显棋, 等. 基于胸部CT图像的肺炎深度学习分类预测模型[J]. 陆军军医大学学报, 2023,45(21):2266-2274. DOI: 10.16016/j.2097-0927.202307139.
Meng ZENG, Na ZHAO, Xianqi WANG, et al. Establishment of a chest-CT-image-based classification deep learning model for pneumonia prediction[J]. Journal of Army Medical University, 2023, 45(21): 2266-2274. DOI: 10.16016/j.2097-0927.202307139.
目的
2
建立基于胸部CT图像的AI模型
实现对细菌、真菌、病毒性(包括COVID-19)肺炎的快速分类预测。
方法
2
回顾性收集2013-2020年就诊于陆军军医大学附属第一医院的559例细菌性、真菌性及非COVID-19病毒性肺炎患者及2020年就诊于重庆大学附属三峡医院的53例COVID-19患者的影像资料
首先利用Resnet_18、Efficientnet_b5、ViT、Swin-Transformer等4种典型的深度神经网络构建图像级三分类及四分类预测模型
在独立测试集中进行验证选出最优模型; 然后分析采用单张图像和3张图像融合构建数据集对模型的影响; 最后分别使用按图像类别占比投票及随机森林2种方法进行患者级分类预测。使用精确率、召回率、特异性、F1值、AUC、准确率评估模型效能
最终筛选出表现最优的AI预测模型。
结果
2
在图像级分类中Swin-Transformer模型表现最佳
三分类准确率为0.932
四分类准确率为0.948。测试Swin-Transformer模型分别采用单张图像和3张图像融合构建数据集的效果
采用融合图像的Swin-Transformer_C模型效能进一步提升
在测试集中三分类准确率和AUC值分别为0.931、0.989
四分类准确率和AUC值分别为0.952、0.990。使用Swin-Transformer_C模型进行患者级分类
采用随机森林的方法预测效能更佳
三分类准确率和AUC值分别为0.984、0.987
四分类准确率和AUC值分别为0.967、0.971。Resnet_18、Efficientent_b5、Vit等3种网络也取得了较好的效果
但总体效能低于Swin-Transformer网络。
结论
2
基于融合数据建立的深度学习模型Swin-Transformer_C与其他4种模型相比在图像级分类中效果最佳
其融合随机森林分类器在患者级分类中也取得最优性能。表明深度学习可用于不同病原体感染所致肺炎类型的快速分类预测。
Objective
2
To establish an AI model based on chest CT images to achieve rapid classification prediction for bacterial
fungal
and viral (including COVID-19) infectious pneumonia.
Methods
2
Chest CT imaging data of 559 bacterial
fungal and non-COVID-19 viral pneumonia patients admitted to the First Affiliated Hospital of Army Medical University from 2013 to 2020 and 53 COVID-19 patients to the Chongqing University Three Gorges Hospital from January 2020 to December 2020 were collected and analyzed retrospectively.Firstly
4 typical deep neural networks (Resnet_18
Efficientnet_b5
ViT
and Swin-Transformer) were used to construct image-level triple and quadruple classification prediction models
and the optimal model was selected by validation in an independent test set.Then
the effects of single-image and three-fused-images to construct dataset on the models were analyzed.Finally
voting by image category and random forest were carried out to make the patient-level classification prediction
respectively.The precision
recall rate
specificity
F1 value
AUC
and accuracy were employed to evaluate the performance of the models in order to screen out the best performing AI prediction model.
Results
2
The Swin Transformer model performed best in image-level classification
with a triple classification accuracy of 0.932 and a quadruple classification accuracy of 0.948.After the model was constructed with single-image and three-fused-images
a model
named as Swin-Transformer_C
which was further improved with fused images
showed good performance
with a triple classification accuracy and AUC of 0.931 and 0.989
and with a quadruple classification accuracy and AUC of 0.952 and 0.990
respectively
in the test set.Patient-level categorization using the Swin-transformer_C model integrated with random forest was more effective
with a triple classification accuracy and AUC of 0.984 and 0.987
and with a quadruple classification accuracy and AUC of 0.967 and 0.971
respectively.Three other networks
Resnet_18
Efficientent_b5 and Vit
also achieved good results
but the overall effectiveness was lower than that of the Swin-transformer network.
Conclusion
2
The deep learning model Swin-transformer_C
built on fused dataset
shows best performance in image-level classification when compared to the other 4 models
and it achieves optimal performance by integrating with random forest classifier in patient-level classification.Our study demonstrates that deep learning can be used for rapid classification prediction of pneumonia types due to different pathogen infections.
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