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纸质出版:2016
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黄梅莓,王世春,张强,宋敏,吴建君,陈敏,陈寒梅,李晨晨,张丹,刁荣华,赵树铭.海藻糖低温保存血小板miRNA差异表达分析[J].陆军军医大学学报(原第三军医大学学报),2016,38(18):2066-2070.
Huang Meimei,Wang Shichun,Zhang Qiang,Song Min,Wu Jianjun,Chen Min,Chen Hanmei,Li Chenchen,Zhang Dan,Diao Ronghua,Zhao Shuming.Differential expression profiles of platelet miRNAs after trehalose cryopreservation[J].J Amry Med Univ (J Third Mil Med Univ),2016,38(18):2066-2070.
黄梅莓,王世春,张强,宋敏,吴建君,陈敏,陈寒梅,李晨晨,张丹,刁荣华,赵树铭.海藻糖低温保存血小板miRNA差异表达分析[J].陆军军医大学学报(原第三军医大学学报),2016,38(18):2066-2070. DOI:
Huang Meimei,Wang Shichun,Zhang Qiang,Song Min,Wu Jianjun,Chen Min,Chen Hanmei,Li Chenchen,Zhang Dan,Diao Ronghua,Zhao Shuming.Differential expression profiles of platelet miRNAs after trehalose cryopreservation[J].J Amry Med Univ (J Third Mil Med Univ),2016,38(18):2066-2070. DOI:
目的 探讨海藻糖低温保存血小板过程中miRNA的变化。 方法 收集3份来自相同血型无偿献血员的单采血小板,少量混匀后,平均分为2组。对照组:新鲜血小板组(22 ℃,100%血浆储存的新鲜血小板2 h);实验组:海藻糖低温保存血小板组(10 ℃,70%海藻糖保存液储存5 d);采用高通量测序方法对两组样品进行了Small RNA测序,进行生物信息分析,主要包括已知miRNA鉴定、miRNA差异表达分析及富集分析。 结果 2组样品经Small RNA高通量测序,平均每个样品获得了11兆净读值(Clean reads),经过生物信息分析,分别获得了821个已知miRNA。通过差异表达分析,在已知的miRNA中共有460个差异表达miRNA,其中194个miRNA表达上调,266个miRNA表达下调,其中显著差异表达已知miRNA共44个,分别在钙离子通路、MAPK通路、凋亡路径、轴突导向等储存损伤相关路径中富集程度较高。相对于对照组,实验组中hsa-miR-4449、hsa-miR-1296表达显著上调(P0.01,且差异倍数2), hsa-miR-665表达被抑制。 结论 血小板经过海藻糖低温保存后的miRNA呈现出特征性表达变化,提示miRNA活动参与了低温时海藻糖对血小板储存损伤的保护作用。
Objective To determine the changes of platelet microRNAs duing trehalose cryopreservation. Methods Three bags of apheresis platelets derived from 3 healthy volunteer blood donors of same blood type were firstly mixed well
and subsequently distributed into the control group (22 ℃
with 100% plasma for 2 h) and the experimental group [10 ℃
with 70% trehalose preservation solution (TPS) for 5 d]. High throughput small RNA sequencing was applied to the 2 groups of platelets
and then the obtained bioinformatic data were analyzed
including known miRNAs identification
differential expression analysis and KEGG pathway analysis. Results High throughput small RNA sequencing obtained 11 million clean reads data for each sample
and bioinformatic analysis identified 821 known miRNAs. In the known miRNAs
a total of 460 miRNAs were differentially expressed
among which 194 were up-regulated and 266 down-regulated. Among these miRNAs
44 known microRNAs had significant differences in expression level
and they were respectively enriched in the signaling pathways relative to storage impairment
such as calcium signaling pathway
MAPK pathway
apoptotic pathway and axon guidance. Compared to the control group
the expression levels of hsa-miR-4449 and has-miR-1296 were up-regulated significantly in experiment group (P0.01
with a fold change of 2)
but the expression of hsa-miR-665 was suppressed. Conclusion After low temperature storage in TPS
platelets have distinctive profiles of differences in miRNAs expression
which suggested that miRNAs are involved in the protection of trehalose to platelet impairment in low temperature.
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