HUANG Guang-yu,MAO Qing,DENG Guo-hong,LAN Lin,LI Jun-gang,JIANG Li,ZHOU Ji-jun,WANG Yu-ming.Correlation of diversity of HIV-1 quasispecies and their HLA-restricted CTL epitopes[J].J Amry Med Univ (J Third Mil Med Univ),2008,30(09):814-816.
HUANG Guang-yu,MAO Qing,DENG Guo-hong,LAN Lin,LI Jun-gang,JIANG Li,ZHOU Ji-jun,WANG Yu-ming.Correlation of diversity of HIV-1 quasispecies and their HLA-restricted CTL epitopes[J].J Amry Med Univ (J Third Mil Med Univ),2008,30(09):814-816.DOI:
Objective To study the correlation of diversity of HIV-1 quasispecies and HLA-restricted CTL epitopes. Methods RNAs were extracted from the plasma samples of 2 pairs of individuals with HIV-1 vertical transmission (mother YJ and her 54-day daughter WYF
mother CM and her 12-month son ZDB) and polymersed by RT-nested PCR. PCR products were T-A cloned. Positive clones were analyzed by conformation sensitive gel electrophoresis (CSGE). The clones of major and minor quasispecies were sequenced. Sequencing results were analyzed to determine CTL epitopes. Results For the first pair mother-child
all CTL epitopes in env region of mother YJ’s HIV-1 quasispecies existed in env region of daughter WYF’s HIV-1 quasispecies
but one of CTL epitopes in env region of WYF’s HIV-1 minor quasispecies was not found in env region of mother YJ’s HIV-1 quasispecies; while for the second pair mother-child
no same CTL epitodes was found in env region of mother CM’s and son ZDB’s HIV-1 quasispecies. Conclusion The longer time after vertical transmission is
the more likely HLA restricted-CTL epitopes will change in mutated HIV-1 quasispecies.