YANG Ju-rong,ZHANG Jian-kai,HE Ya-ni,LI Xin-lun,LIANG Hai-jun,LIN Jing.Bioinformatics analysis of human NaDC1 proximal promoter and construction of firefly report gene vector[J].J Amry Med Univ (J Third Mil Med Univ),2007,29(14):1410-1412.
YANG Ju-rong,ZHANG Jian-kai,HE Ya-ni,LI Xin-lun,LIANG Hai-jun,LIN Jing.Bioinformatics analysis of human NaDC1 proximal promoter and construction of firefly report gene vector[J].J Amry Med Univ (J Third Mil Med Univ),2007,29(14):1410-1412.DOI:
Objective To bioinformatically analyze the human NaDC1 promoter for predicting possible regulative zone and cis element and construct firefly luciferase report gene vector for 5’ flanking regulated elements of hNaDC1 gene. Methods The proximal promoter of hNaDC1 was analyzed by using FirstEF online software to obtain its sequence. Meanwhile
the binding sites of transcription factors were predicted by software Matinspector 5.0. The DNA fragment hNaDC1A (-2 232/+136) of 5’ flanking of hNaDC1 gene were amplified from the genomic DNAs of human renal proximal tubular cells (HK-2) by PCR
the products of which were cloned into pGL3-Basic after digestion with KpnⅠ and Hind Ⅲ. The recombinant plasmid pGL3-hNaDC1A was used for restriction endonucleases digestion and DNA sequencing. Results The 2.4 kb (-2 232/+136) sequence of hNaDC1 proximal promoter was obtained by FirstEF. Matinspector 5.0 showed 152 cis-acting elements (74 sorts) within the proximal promoter. The expression vector pGL3-hNaDC1A was constructed successfully. Conclusion The construction of firefly report gene vector offers experimental basis for studying the distribution of transcriptional regulation elements and their characteristics with the help of dual luciferase report gene assay system.