Investigation on expression pattern of multidrug resistance-associated gene in human small cell lung cancer cell lines SH77/CDDP using gene chip technique
ZHOU Xiang-dong,QIAN Gui-sheng,LIU Ling-zhi.Investigation on expression pattern of multidrug resistance-associated gene in human small cell lung cancer cell lines SH77/CDDP using gene chip technique[J].J Amry Med Univ (J Third Mil Med Univ),2007,29(04):279-283.
ZHOU Xiang-dong,QIAN Gui-sheng,LIU Ling-zhi.Investigation on expression pattern of multidrug resistance-associated gene in human small cell lung cancer cell lines SH77/CDDP using gene chip technique[J].J Amry Med Univ (J Third Mil Med Univ),2007,29(04):279-283.DOI:
Objective To obtain the expression pattern of multidrug resistance-associated gene in human small cell lung cancer (SCLC) MDR cell line SH77/CDDP and provide basis for further studying the mechanism of human SCLC MDR induced by cisplatin. Methods Total RNA was isolated from SCLC MDR cell line SH77/CDDP and its parental cells
and synthesized into double-stranded cDNA
then synthesized into biotin-labeled cRNA probe by in vitro transcription. The cRNA probes were separately hybridized with Affymetrix GeneChip and human U133 set chips (U133A and U133B
containing 39 000 transcripts
including 33 000 known human genes and 6 000 unknown cDNA expression sequence tags
ESTs)
and the signals were scanned by the GeneArray Scanner. The results were analyzed by bioinformatics. Results Compared with the gene expression profile of parental SH77 cells
2 389(6.13%) genes were up-regulated in SCLC MDR cell line SH77/CDDP cells
of which 461 (1.19%)
89 (0.23%)
26 (0.07%) and 7 (0.02%) genes were separately up-regulated one-fold
two-folds
three-folds and four-folds.36 genes
including ABCC3
HSP70
CYP26B1
CYP4A11
IGF1R
LOX2
CAP2
LRP2BP
AKNA
ELTD1 and otherwise,were up-regulated 2.5-5.1 folds. According to Gene Ontology and Tree View analysis
these 35 genes were involved in transport
cell adhesion
signal transduction
transcription and ion binding and so on. Conclusion Many multidrug resistance-associated genes induced by cisplatin have been screened by high-throughput gene chip method. Validating their cellular functions will help to identify the mechanism of human SCLC MDR induced by cisplatin.