Hallmark guided identification and characterization of a novel immune-relevant signature for prognostication of recurrence in stage I–III lung adenocarcinoma
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Full-length article|更新时间:2023-08-29
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Hallmark guided identification and characterization of a novel immune-relevant signature for prognostication of recurrence in stage I–III lung adenocarcinoma
Genes & DiseasesVol. 10, Issue 4, (2023)
作者机构:
1. Clinical Research Center, The Second Affiliated Hospital, School of Medicine, Zhejiang University,Zhejiang,Hangzhou,China,310003
2. State Key Laboratory of Southwestern Chinese Medicine Resources, School of Basic Medical Sciences, Chengdu University of Traditional Chinese Medicine,Sichuan,Chengdu,China,611137
3. West China School of Medicine, West China Hospital, Sichuan University,Sichuan,Chengdu,China,610041
4. Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology, Macau,China,999078
5. Biorepository, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University,Sichuan,Chengdu,China,610041
6. Guangzhou Women and Children's Medical Center, Guangzhou Medical University,Guangdong,Guangzhou,China,510620
Yongqiang Zhang, Zhao Yang, Yuqin Tang, et al. Hallmark guided identification and characterization of a novel immune-relevant signature for prognostication of recurrence in stage I–III lung adenocarcinoma. [J]. Genes & Diseases 10(4).(2023)
DOI:
Yongqiang Zhang, Zhao Yang, Yuqin Tang, et al. Hallmark guided identification and characterization of a novel immune-relevant signature for prognostication of recurrence in stage I–III lung adenocarcinoma. [J]. Genes & Diseases 10(4).(2023) DOI: 10.1016/j.gendis.2022.07.005.
Hallmark guided identification and characterization of a novel immune-relevant signature for prognostication of recurrence in stage I–III lung adenocarcinoma
摘要
Abstract
The high risk of postoperative mortality in lung adenocarcinoma (LUAD) patients is principally driven by cancer recurrence and low response rates to adjuvant treatment. Here
A combined cohort containing 1
026 stage I–III patients was divided into the learning (
n
= 678) and validation datasets (
n
= 348). The former was used to establish a 16-mRNA risk signature for recurrence prediction with multiple statistical algorithms
which was verified in the validation set. Univariate and multivariate analyses confirmed it as an independent indicator for both recurrence-free survival (RFS) and overall survival (OS). Distinct molecular characteristics between the two groups including genomic alterations
and hallmark pathways were comprehensively analyzed. Remarkably
the classifier was tightly linked to immune infiltrations
highlighting the critical role of immune surveillance in prolonging survival for LUAD. Moreover
the classifier was a valuable predictor for therapeutic responses in patients
and the low-risk group was more likely to yield clinical benefits from immunotherapy. A transcription factor regulatory protein–protein interaction network (TF-PPI-network) was constructed via weighted gene co-expression network analysis (WGCNA) concerning the hub genes of the signature. The constructed multidimensional nomogram dramatically increased the predictive accuracy. Therefore
our signature provides a forceful basis for individualized LUAD management with promising potential implications.
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Identification of inflammatory factor-related genes associated with the prognosis and immune cell infiltration in colorectal cancer patients
VPS33B suppresses lung adenocarcinoma metastasis and chemoresistance to cisplatin
Transcriptomic profiling of peroxisome-related genes reveals a novel prognostic signature in hepatocellular carcinoma
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Related Institution
Breast Plastic and Reconstructive Surgery Center, Plastic Surgery Hospital, Chinese Academy of Medical Sciences, Peking Union Medical College
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Department of Anesthesiology, The Second Affiliated Hospital of Nanchang University
Jiangxi Province Key Laboratory of Laboratory Medicine, Jiangxi Provincial Clinical Research Center for Laboratory Medicine, Department of Clinical Laboratory, The Second Affiliated Hospital of Nanchang University