Identification of cross-reactive CD8+ T cell receptors with high functional avidity to a SARS-CoV-2 immunodominant epitope and its natural mutant variants
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Identification of cross-reactive CD8+ T cell receptors with high functional avidity to a SARS-CoV-2 immunodominant epitope and its natural mutant variants
Genes & DiseasesVol. 9, Issue 1, (2022)
作者机构:
1. Department of Immunology, College of Basic Medicine, Chongqing Medical University,Chongqing,PR China,400016
2. Chongqing Key Laboratory of Cancer Immunology Translational Medicine, Chongqing Medical University,Chongqing,PR China,400016
3. Department of Breast Surgery, Harbin Medical University Cancer Hospital,Heilongjiang,Harbin,PR China,150081
4. Department of Cardiothoracic Surgery, The First Affiliated Hospital of Chongqing Medical University,Chongqing,PR China,400016
Chao Hu, Meiying Shen, Xiaojian Han, et al. Identification of cross-reactive CD8+ T cell receptors with high functional avidity to a SARS-CoV-2 immunodominant epitope and its natural mutant variants. [J]. Genes & Diseases 9(1).(2022)
DOI:
Chao Hu, Meiying Shen, Xiaojian Han, et al. Identification of cross-reactive CD8+ T cell receptors with high functional avidity to a SARS-CoV-2 immunodominant epitope and its natural mutant variants. [J]. Genes & Diseases 9(1).(2022) DOI: 10.1016/j.gendis.2021.05.006.
Identification of cross-reactive CD8+ T cell receptors with high functional avidity to a SARS-CoV-2 immunodominant epitope and its natural mutant variants
摘要
Abstract
Despite the growing knowledge of T cell responses in COVID-19 patients
there is a lack of detailed characterizations for T cell-antigen interactions and T cell functions. Here
with a predicted peptide library from SARS-CoV-2 S and N proteins
we found that specific CD8
+
T cell responses were identified in over 75% of COVID-19 convalescent patients (15/20) and an epitope from the N protein
N
361-369
(KTFPPTEPK)
was the most dominant epitope from our selected peptide library. Importantly
we discovered 2 N
361-369
-specific T cell receptors (TCRs) with high functional avidity that were independent of the CD8 co-receptor. These TCRs exhibited complementary cross-reactivity to several presently reported N
361-369
mutant variants
as to the wild-type epitope. Further
the natural functions of these TCRs in the cytotoxic immunity against SARS-CoV-2 were determined with dendritic cells (DCs) and the lung organoid model. We found that the N
361-369
epitope could be normally processed and endogenously presented by these different types of antigen presenting cells
to elicit successful activation and effective cytotoxicity of CD8
+
T cells
ex vivo
. Our study evidenced potential mechanisms of cellular immunity to SARS-CoV-2
and illuminated potential ways of viral clearance in COVID-19 patients. These results indicate that utilizing CD8-independent TCRs against SARS-CoV-2-associated antigens may provide functional superiority that is beneficial for the adoptive cell immunotherapies based on natural or genetically engineered T cells. Additionally
this information is highly relevant for the development of the next-generation vaccines with protections against continuously emerged SARS-CoV-2 mutant strains.
关键词
Keywords
CD8+T cellHLA class ILung organoidSARS-Cov-2T cell epitopeTCR
COVID-19 therapeutics: Clinical application of repurposed drugs and futuristic strategies for target-based drug discovery
Advances of CRISPR-Cas13 system in COVID-19 diagnosis and treatment
Single-cell transcriptome landscape and antigen receptor dynamic during SARS-CoV-2 vaccination
Reduced neutralization of SARS-CoV-2 B.1.617 variant by convalescent and vaccinated sera
Pandemic COVID-19: Current status and challenges of antiviral therapies
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