Application of 1H-NMR-based pattern recognition in plasma metabolomics of rats with diffuse axonal injury
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Application of 1H-NMR-based pattern recognition in plasma metabolomics of rats with diffuse axonal injury
Journal of Chongqing Medical UniversityVol. 43, Issue 2, Pages: 167(2018)
作者机构:
1. 重庆医科大学基础医学院法医学教研室,重庆,400016
2. 重庆医药高等专科学校医学技术学院生物化学教研室,重庆,401331
3. 遵义医药高等专科学校基础医学部病理学教研室,遵义,563006
4. 重庆市公安局刑警总队技术处,重庆,400021
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Published:2018,
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Xiong Jincheng, Zhu Shisheng, Zhao Peng, et al. Application of 1H-NMR-based pattern recognition in plasma metabolomics of rats with diffuse axonal injury. [J]. Journal of Chongqing Medical University 43(2):167(2018)
DOI:
Xiong Jincheng, Zhu Shisheng, Zhao Peng, et al. Application of 1H-NMR-based pattern recognition in plasma metabolomics of rats with diffuse axonal injury. [J]. Journal of Chongqing Medical University 43(2):167(2018)DOI:
Application of 1H-NMR-based pattern recognition in plasma metabolomics of rats with diffuse axonal injury
Objective:To investigate the feasibility of applying 1H-NMR-based pattern recognition in the studies of plasma metabo-nomics of Sprague-Dawley(SD) rats with diffuse axonal injury(DAI) and identify potential metabolic markers of DAI at early stage. Methods:Modified Marmarou A method was used to establish the model of DAI in SD rats. All animals were sacrificed at 1 d post in-sult. Plasma was prepared with heart blood. 1H-NMR technique was applied for detection of plasma samples from sham-injured group(n=6) and injured group(n=6). Pattern recognition of partial least squares discriminant analysis(PLS-DA) and orthogonal signal correction-partial least squares discriminant analysis(OPLS-DA) were used to analyze and determine the differences of plasma metabolites between the two groups. Results:Different metabolites between sham-injured group and injured group were found by cor-relation analysis and student’s t test,metabolites were selected on condition that correlation coefficient丨r丨>0.6 and P<0.05. Finally,Pyruvate(r=-0.831,P=0.019),Lysine(r=-0.773,P=0.030),Glutamate(r=-0.772,P=0.042),Glutamine(r=-0.772,P=0.042),Isobutyrate(r=-0.631,P=0.045) and Glycerol(r=-0.844,P=0.032) significantly increased in injured group compared with those of sham-injured group. Malonate(r=0.699,P=0.038),L2(r=0.786,P=0.047),L3(r=0.666,P=0.031),L4(r=0.715,P=0.022),L10(r=0.663,P=0.025),β-Glucose(r=0.800,P=0.030) and α-Glucose(r=0.808,P=0.015) significantly decreased in in-jured group compared with those of sham-injured group. Conclusion:1H-NMR technique is effective in the study of plasma metabo-nomics of SD rats with DAI. The different metabolites may suggest the possible pathophysiological mechanism of DAI and lay the foundation for the research of early diagnosis,treatment and forensic identification of DAI.
关键词
弥漫性轴索损伤代谢组学1H-NMRSD大鼠
Keywords
diffuse axonal injurynuclear magnetic resonancemetabonomicsSD rats