Jin Ge,Xu Xiaoyan,Zhang Liang,Ma Lihua,Huang Rongzhong,Deng Jing,Li Wenjuan,FangLiang,Xie Peng.Optimization of PCR buffer for Borna disease virus real-time PCR diagnostic kit[J].J Amry Med Univ (J Third Mil Med Univ),2011,33(13):1323-1327.
Jin Ge,Xu Xiaoyan,Zhang Liang,Ma Lihua,Huang Rongzhong,Deng Jing,Li Wenjuan,FangLiang,Xie Peng.Optimization of PCR buffer for Borna disease virus real-time PCR diagnostic kit[J].J Amry Med Univ (J Third Mil Med Univ),2011,33(13):1323-1327.DOI:
Optimization of PCR buffer for Borna disease virus real-time PCR diagnostic kit
Objective To select and optimize the PCR buffer for Borna disease virus real-time fluorescence quantitative PCR diagnostic kit in order to significantly improve PCR amplification efficiency to BDV p24 gene. Methods Conventional PCR was used to contrast the PCR buffers which titrated with hydrochloric acid
phosphoric acid and sulfuric acid respectively
and the appropriate concentration of ammonium sulfate was further explored to prepare TSS buffer. Four PCR additives (TMAC
Triton X-100
DMSO and betaine) were added into TSS buffer respectively to determine each optimal working concentration. One appropriate additive was mixed into other additives by turns in order to find out the most effective combination. Finally the efficiency of these different PCR buffers was verified by real-time PCR. Results Compared to other acids
sulfuric acid was more suitable to titrate the buffer. The optimal concentration of ammonium sulfate was identified as 6 mmol/L to prepare TSS buffer. Furthermore
real-time PCR results indicated that TBTT buffer (TSS buffer mixed with 1.5 mol/L betaine
8 mmol/L TMAC
and 0.15% Triton X-100) was the most effective buffer compare to other PCR additive mix and was more effective to amplify p24 gene than Takara PCR buffer. Conclusion The PCR buffer for amplifying BDV p24 gene is successfully optimized.