GAO Tian,LIANG Zhi-qing,NIE Yan-li,HU Hua.DNA methylation in β-thalassemia by oligonucleotide microarray[J].J Amry Med Univ (J Third Mil Med Univ),2009,31(24):2469-2472.
GAO Tian,LIANG Zhi-qing,NIE Yan-li,HU Hua.DNA methylation in β-thalassemia by oligonucleotide microarray[J].J Amry Med Univ (J Third Mil Med Univ),2009,31(24):2469-2472.DOI:
DNA methylation in β-thalassemia by oligonucleotide microarray
Objective To search and analyze the DNA methylation-related genes of β-thalassemia by oligonucleotide microarray in order to explore a new method for early diagnosis of β-thalassemia. Methods The cord blood samples of 2 children with β-thalassemia and 2 health children were detected by a chip containing human DNA methylation 30 178 oligonucleotide probes. The chip results were verified by the methods of methylation-specific PCR (MSP) and real-time PCR. The statistical significance of differentially expressed genes was found on non-supervised clustering (Hierarchical clustering). Results A total of 209 genetic differences (ratio≥2.0 or≤0.5) were showed by 2 groups of chips
and of them 113 genes were up-regulated and 96 genes were down-regulated. The results showed that the methylation-related gene erythroblastic leukemia viral (v-erb-a) was of hypermethylation compared with the normal blood. Conclusion A large number of differentially expressed genes are screened out by the technology of High-throughput DNA methylation of the gene chip in thalassemia. The DNA methylation-related gene of v-erb-a is of hypermethylation in thalassemia. Our methods offers a new idea and approach for prenatal diagnosis for thalassemia by the DNA methylation-related microarray.