XIE Lin,LIU Ren,ZHU Xu-dong,HE Xiang-ge,CHEN Cai-yu.Screening of nucleic acids affinity to recombinant human TGF-β RⅡ[J].J Amry Med Univ (J Third Mil Med Univ),2008,30(23):2168-2171.
XIE Lin,LIU Ren,ZHU Xu-dong,HE Xiang-ge,CHEN Cai-yu.Screening of nucleic acids affinity to recombinant human TGF-β RⅡ[J].J Amry Med Univ (J Third Mil Med Univ),2008,30(23):2168-2171.DOI:
Screening of nucleic acids affinity to recombinant human TGF-β RⅡ
Objective To select the aptamer to an extracellular soluble fragment of recombinant human TGF-β receptor Ⅱ (TGF-β RⅡ) in order to antagonize TGF-β effectively by using systematic evolution of ligants by exponential enrichment (SELEX). Methods Initial random RNA library was transcripted in vitro from ssDNA 5′-TAATACGACTCACTATAGGGAGGACGATGCGG-N60-CAGACGACTCCCCGA-3′; rhTGF-β RⅡ was used as target protein. Totally
selection of 8 times was carried out in SELEX experiment. Membrane binding assay was performed to detect the evolution of enriched RNA library; Electrophoretic mobility shift assay (EMSA) was done to determine the affinity between the selected nucleic acid sequence and TGF-β RⅡ. Results Evolution of the enriched RNA library along the increased affinity to TGF-β RⅡ was observed with the development of selection. Two types of dominant sequences were isolated and named as sequence A and sequence B. In membrane binding assay
both sequences A and B showed obvious affinity to TGF-β RⅡ. However
no retarded bands were seen in EMSA. Conclusion The affinity of sequences A and B to TGF-β RⅡ is beyond satisfaction. However
possible sequences with improved affinity to TGF-β RⅡ can be selected by post-SELEX on the basis of candidate sequences A and B.